PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_06801
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 150aa    MW: 17202.7 Da    PI: 9.9498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_06801genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-18555256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +g+WvAeIr p +   r r +lg++++ae Aa a+++a+ kl+ge
  PEQU_06801  5 IYRGVRQRN-WGKWVAEIRLPQN---RMRLWLGTYDSAEAAAYAYDRAAYKLRGE 55
                59****998.**********954...59*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.03E-14464No hitNo description
PfamPF008479.5E-13555IPR001471AP2/ERF domain
SMARTSM003802.7E-33568IPR001471AP2/ERF domain
PROSITE profilePS5103223.13562IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-30563IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23563IPR016177DNA-binding domain
PRINTSPR003673.4E-13617IPR001471AP2/ERF domain
PRINTSPR003673.4E-134464IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MKKKIYRGVR QRNWGKWVAE IRLPQNRMRL WLGTYDSAEA AAYAYDRAAY KLRGEYARLN  60
FPELRDAGAE CSDKLRELRL AVDSKIQAVC QRLAKQRKKR RGEGEKKGED RKGEQSLMVG  120
EGGGEMDGGE CSLARFPSFD VDLIWEVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-20262263ATERF1
3gcc_A9e-20262263ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924856.15e-57PREDICTED: ethylene-responsive transcription factor ERF061-like
SwissprotQ9LM152e-40RA213_ARATH; Ethylene-responsive transcription factor RAP2-13
TrEMBLK7UTJ81e-50K7UTJ8_MAIZE; AP2-EREBP transcription factor
TrEMBLA0A059CG702e-50A0A059CG70_EUCGR; Uncharacterized protein
STRINGGRMZM2G100982_P013e-50(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88282842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.12e-33ERF family protein